PROVEAN

PROVEAN Mouse Genome Variants

This tool provides PROVEAN and SIFT predictions for a list of mouse genome variants.

Input: A list of mouse genomic variants. See example.
Output: PROVEAN scores and predictions along with available SIFT predictions. See example.

Step 1. Enter a list of genomic coordinates and variants

Paste in your coordinates and variants: [format]

Example (upload example)

1,9967370,C,T,rs31551052 1,9978944,A,T,rs218557818 6,128525258,C,T,rs13460967 1,9978944,A,. 1,9978944,A,ACTAAAA MT,3220,A,G

Or upload a file containing variants (5MB limit):

Step 2. Select gene annotation (optional)

Ensembl Gene ID
Associated Gene Name
Ensembl Transcript ID
Transcript Status
Gene Description
% GC Content
Chromosome band
Ensembl Protein Family ID

Ensembl Family Description
UniProt/SwissProt ID
RefSeq Protein ID
PFAM ID
TIGRFam ID
Interpro ID
GO Term Accession
GO Slim GOA Accession

Parameters

Assembly/Annotation:

Email (optional)

If provided, results will be sent via email.